U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC8286815 mannosyl-oligosaccharide glucosidase GCS1 [ Ricinus communis (castor bean) ]

Gene ID: 8286815, updated on 30-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC8286815
Gene description
mannosyl-oligosaccharide glucosidase GCS1
Locus tag
RCOM_1080760
Gene type
protein coding
RefSeq status
MODEL
Organism
Ricinus communis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC8286815 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
22
Annotation release Status Assembly Chr Location
102 current ASM1957865v1 (GCF_019578655.1) 7 NC_063262.1 (28241518..28250016)
101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994293.1 (1039111..1047608, complement)

Chromosome 7 - NC_063262.1Genomic Context describing neighboring genes Neighboring gene uncharacterized mitochondrial protein AtMg00810-like Neighboring gene receptor like protein 22-like Neighboring gene inactive protein RESTRICTED TEV MOVEMENT 1 Neighboring gene nuclear pore complex protein NUP54 Neighboring gene F-box/kelch-repeat protein At1g67480

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Glc3Man9GlcNAc2 oligosaccharide glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
mannosyl-oligosaccharide glucosidase GCS1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1957865v1

Genomic

  1. NC_063262.1 Reference ASM1957865v1

    Range
    28241518..28250016
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002514887.4 → XP_002514933.1  mannosyl-oligosaccharide glucosidase GCS1

    See identical proteins and their annotated locations for XP_002514933.1

    UniProtKB/TrEMBL
    B9RMG4
    Conserved Domains (2) summary
    pfam03200
    Location:350 → 847
    Glyco_hydro_63; Glycosyl hydrolase family 63 C-terminal domain
    pfam16923
    Location:109 → 302
    Glyco_hydro_63N; Glycosyl hydrolase family 63 N-terminal domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials