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LOC8283084 lupeol synthase-like [ Ricinus communis (castor bean) ]

Gene ID: 8283084, updated on 30-Nov-2023

Summary

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Gene symbol
LOC8283084
Gene description
lupeol synthase-like
Locus tag
RCOM_0010700
Gene type
protein coding
RefSeq status
MODEL
Organism
Ricinus communis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Genomic context

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See LOC8283084 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
18
Annotation release Status Assembly Chr Location
102 current ASM1957865v1 (GCF_019578655.1) 8 NC_063263.1 (11056896..11065300)
101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994715.1 (14466..22743, complement)

Chromosome 8 - NC_063263.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC8283085 Neighboring gene uncharacterized LOC8283083 Neighboring gene lupeol synthase-like Neighboring gene lupeol synthase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-amyrin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in triterpenoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lupeol synthase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1957865v1

Genomic

  1. NC_063263.1 Reference ASM1957865v1

    Range
    11056896..11065300
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015726160.3 → XP_015581646.1  lupeol synthase-like isoform X2

    UniProtKB/TrEMBL
    B9SWS3
    Conserved Domains (2) summary
    PLN03012
    Location:1 → 747
    PLN03012; Camelliol C synthase
    cd02892
    Location:98 → 740
    SQCY_1; Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization ...

  2. XM_015726159.3 → XP_015581645.1  lupeol synthase-like isoform X1

    UniProtKB/TrEMBL
    B9SWS3
    Conserved Domains (2) summary
    PLN03012
    Location:1 → 749
    PLN03012; Camelliol C synthase
    cd02892
    Location:98 → 742
    SQCY_1; Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization ...

  3. XM_015726161.3 → XP_015581647.1  lupeol synthase-like isoform X3

    UniProtKB/TrEMBL
    B9SWS3
    Conserved Domains (2) summary
    PLN03012
    Location:1 → 724
    PLN03012; Camelliol C synthase
    cd02892
    Location:98 → 717
    SQCY_1; Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization ...

RNA

  1. XR_007216873.1 RNA Sequence

  2. XR_007216874.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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