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SRF8 STRUBBELIG-receptor family 8 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828302, updated on 18-Sep-2024

Summary

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Official Symbol
SRF8
Official Full Name
STRUBBELIG-receptor family 8
Primary source
TAIR:AT4G22130
Locus tag
AT4G22130
See related
Araport:AT4G22130
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F1N20.230; F1N20_230; STRUBBELIG-receptor family 8
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Genomic context

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See SRF8 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
15
Sequence:
Chromosome: 4; NC_003075.7 (11723388..11727693)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene SCR-like 14 Neighboring gene ERD (early-responsive to dehydration stress) family protein Neighboring gene PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein Neighboring gene UBA/UBX domain protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A DEK domain-containing protein modulates chromatin structure and function in Arabidopsis. Waidmann S, et al. Plant Cell, 2014 Nov. PMID 25387881, Free PMC Article
  2. An extracellular network of Arabidopsis leucine-rich repeat receptor kinases. Smakowska-Luzan E, et al. Nature, 2018 Jan 18. PMID 29320478, Free PMC Article
  3. Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. Nühse TS, et al. Mol Cell Proteomics, 2003 Nov. PMID 14506206
  4. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  5. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001125558.1
NM_118334.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane HDA PubMed 

General protein information

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Preferred Names
STRUBBELIG-receptor family 8
NP_001119030.1
  • STRUBBELIG-receptor family 8 (SRF8); FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 6 (TAIR:AT1G53730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_193944.2
  • STRUBBELIG-receptor family 8 (SRF8); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 6 (TAIR:AT1G53730.1); Has 157986 Blast hits to 122624 proteins in 4302 species: Archae - 115; Bacteria - 15061; Metazoa - 46349; Fungi - 9189; Plants - 68190; Viruses - 340; Other Eukaryotes - 18742 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    11723388..11727693
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118334.5 → NP_193944.2  STRUBBELIG-receptor family 8 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_193944.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O65461, Q6R2J8
    UniProtKB/TrEMBL
    A0A178V0K9, A0A384KGH4, A0A7G2F6I0, C0LGR0
    Conserved Domains (4) summary
    PLN00113
    Location:75 → 694
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    cd14066
    Location:401 → 672
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    sd00033
    Location:99 → 120
    LRR_RI; leucine-rich repeat [structural motif]
    pfam08263
    Location:30 → 70
    LRRNT_2; Leucine rich repeat N-terminal domain

  2. NM_001125558.1 → NP_001119030.1  STRUBBELIG-receptor family 8 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001119030.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B3H541
    Conserved Domains (3) summary
    cd14066
    Location:260 → 531
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    sd00033
    Location:4 → 27
    LRR_RI; leucine-rich repeat [structural motif]
    pfam07714
    Location:254 → 528
    Pkinase_Tyr; Protein tyrosine kinase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6R2J8.1

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