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CRK ARP2/3 complex 16 kDa subunit (p16-Arc) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828087, updated on 18-Sep-2024

Summary

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Official Symbol
CRK
Official Full Name
ARP2/3 complex 16 kDa subunit (p16-Arc)
Primary source
TAIR:AT4G01710
Locus tag
AT4G01710
See related
Araport:AT4G01710
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARPC5; CROOKED; T15B16.22; T15B16_22
Summary
belongs to the DIS(distorted) gene family. Encodes a actin polymerization factor. Involved in cell expansion of trichome.
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Genomic context

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See CRK in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Sequence:
Chromosome: 4; NC_003075.7 (735653..736965)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Chitinase family protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene WRKY family transcription factor Neighboring gene DHHC-type zinc finger family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis CROOKED encodes for the smallest subunit of the ARP2/3 complex and controls cell shape by region specific fine F-actin formation. Mathur J, et al. Development, 2003 Jul. PMID 12783786
  2. Regulation of cell expansion by the DISTORTED genes in Arabidopsis thaliana: actin controls the spatial organization of microtubules. Schwab B, et al. Mol Genet Genomics, 2003 Jun. PMID 12690443
  3. Breaking the WAVE complex: the point of Arabidopsis trichomes. Szymanski DB. Curr Opin Plant Biol, 2005 Feb. PMID 15653407
  4. The actin cytoskeleton is required to elaborate and maintain spatial patterning during trichome cell morphogenesis in Arabidopsis thaliana. Mathur J, et al. Development, 1999 Dec. PMID 10572033
  5. The role of Arabidopsis SCAR genes in ARP2-ARP3-dependent cell morphogenesis. Uhrig JF, et al. Development, 2007 Mar. PMID 17267444

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_116401.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables actin binding TAS
Traceable Author Statement
more info
 PubMed 
Process Evidence Code Pubs
involved_in Arp2/3 complex-mediated actin nucleation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within actin cytoskeleton organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within actin filament organization TAS
Traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within actin filament polymerization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within multidimensional cell growth IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in regulation of actin filament polymerization IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within trichome morphogenesis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
part_of Arp2/3 protein complex TAS
Traceable Author Statement
more info
 PubMed 
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
ARP2/3 complex 16 kDa subunit (p16-Arc)
NP_567216.1
  • CROOKED (CRK); CONTAINS InterPro DOMAIN/s: ARP2/3 complex 16kDa subunit (p16-Arc) (InterPro:IPR006789); BEST Arabidopsis thaliana protein match is: ARP2/3 complex 16 kDa subunit (p16-Arc) (TAIR:AT5G65274.1); Has 360 Blast hits to 360 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 256; Fungi - 50; Plants - 40; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    735653..736965
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_116401.3 → NP_567216.1  ARP2/3 complex 16 kDa subunit (p16-Arc) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567216.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q941F3, Q9M117
    UniProtKB/TrEMBL
    A0A178UZC8, A0A5S9XNY8
    Conserved Domains (1) summary
    pfam04699
    Location:3 → 127
    P16-Arc; ARP2/3 complex 16 kDa subunit (p16-Arc)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9M117.2

Gene LinkOut

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