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LOC8278160 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic [ Ricinus communis (castor bean) ]

Gene ID: 8278160, updated on 30-Nov-2023

Summary

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Gene symbol
LOC8278160
Gene description
1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic
Locus tag
RCOM_0022940
Gene type
protein coding
RefSeq status
MODEL
Organism
Ricinus communis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Genomic context

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See LOC8278160 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
22
Annotation release Status Assembly Chr Location
102 current ASM1957865v1 (GCF_019578655.1) 10 NC_063265.1 (15978206..15994165, complement)
101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002995227.1 (6086..21950, complement)

Chromosome 10 - NC_063265.1Genomic Context describing neighboring genes Neighboring gene transfer RNA asparagine (anticodon GUU) Neighboring gene growth-regulating factor 3 Neighboring gene tyrosine-protein phosphatase RLPH2 Neighboring gene ABC transporter G family member 39

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,4-alpha-glucan branching enzyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cation binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in starch metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic; 1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1957865v1

Genomic

  1. NC_063265.1 Reference ASM1957865v1

    Range
    15978206..15994165 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002534065.4 → XP_002534111.2  1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic isoform X1

  2. XM_015728345.2 → XP_015583831.2  1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic isoform X2

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials