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DSEL alpha/beta-Hydrolases superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827587, updated on 18-Sep-2024

Summary

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Official Symbol
DSEL
Official Full Name
alpha/beta-Hydrolases superfamily protein
Primary source
TAIR:AT4G18550
Locus tag
AT4G18550
See related
Araport:AT4G18550
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
Arabidopsis thaliana DAD1-like seeding establishment-related lipase; AtDSEL; DAD1-like seeding establishment-related lipase; F28J12.210; F28J12_210
Summary
DSEL is cytosolic acylhydrolase that shows prefential lipase activity against the sn-1 position of several classes of lipids, including 1,3-diacylglycerols and 1-monoacylglycerols. Overexpression of DSEL leads to increased peroxisome and oil body levels in cotyledons and reduced beta-oxidation activity in seedlings.
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Genomic context

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See DSEL in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Sequence:
Chromosome: 4; NC_003075.7 (10224661..10227140, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene lysine ketoglutarate reductase trans-splicing-like protein, putative (DUF707) Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. AtDSEL, an Arabidopsis cytosolic DAD1-like acylhydrolase, is involved in negative regulation of storage oil mobilization during seedling establishment. Kim EY, et al. J Plant Physiol, 2011 Sep 15. PMID 21477884
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. AtDSEL is involved in the negative regulation of seedling establishment by inhibiting the breakdown of storage oils.
    Title: AtDSEL, an Arabidopsis cytosolic DAD1-like acylhydrolase, is involved in negative regulation of storage oil mobilization during seedling establishment.
Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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Homology

NM_117969.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables monoacylglycerol lipase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables phospholipase A1 activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within diacylglycerol catabolic process IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within lipid storage IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within monoacylglycerol catabolic process IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in negative regulation of seed germination IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
alpha/beta-Hydrolases superfamily protein
NP_193590.1
  • alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06250.1); Has 1222 Blast hits to 1214 proteins in 260 species: Archae - 0; Bacteria - 234; Metazoa - 8; Fungi - 231; Plants - 573; Viruses - 1; Other Eukaryotes - 175 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    10224661..10227140 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001341292.1 → NP_001328832.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UTS0, A0A1P8B5V5, A0A5S9XTZ0
    Conserved Domains (1) summary
    PLN02571
    Location:30 → 434
    PLN02571; triacylglycerol lipase

  2. NM_001341293.1 → NP_001328833.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B5V6

  3. NM_117969.3 → NP_193590.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_193590.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O49523, Q8GXS9
    UniProtKB/TrEMBL
    A0A178UTS0
    Conserved Domains (2) summary
    PLN02571
    Location:13 → 417
    PLN02571; triacylglycerol lipase
    cl21494
    Location:23 → 408
    Abhydrolase; alpha/beta hydrolases
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O49523.1

Gene LinkOut

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