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LOC8274845 probable beta-1,3-galactosyltransferase 2 [ Ricinus communis (castor bean) ]

Gene ID: 8274845, updated on 10-Oct-2024

Summary

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Gene symbol
LOC8274845
Gene description
probable beta-1,3-galactosyltransferase 2
Locus tag
RCOM_0488310
Gene type
protein coding
RefSeq status
MODEL
Organism
Ricinus communis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Genomic context

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See LOC8274845 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
12
Annotation release Status Assembly Chr Location
102 current ASM1957865v1 (GCF_019578655.1) 7 NC_063262.1 (20544944..20550334)
101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994436.1 (445718..450757)

Chromosome 7 - NC_063262.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125370712 Neighboring gene protein RRP6-like 3 Neighboring gene probable protein S-acyltransferase 1 Neighboring gene 11S globulin Neighboring gene legumin A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable beta-1,3-galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1957865v1

Genomic

  1. NC_063262.1 Reference ASM1957865v1

    Range
    20544944..20550334
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015722398.3 → XP_015577884.1  probable beta-1,3-galactosyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    B9SDX5
    Conserved Domains (3) summary
    PLN03193
    Location:1 → 416
    PLN03193; beta-1,3-galactosyltransferase; Provisional
    pfam13334
    Location:25 → 122
    DUF4094; Domain of unknown function (DUF4094)
    cl21608
    Location:161 → 359
    Galactosyl_T; Galactosyltransferase

  2. XM_002524148.4 → XP_002524194.2  probable beta-1,3-galactosyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    B9SDX5
    Conserved Domains (3) summary
    PLN03193
    Location:1 → 413
    PLN03193; beta-1,3-galactosyltransferase; Provisional
    pfam13334
    Location:25 → 119
    DUF4094; Domain of unknown function (DUF4094)
    cl21608
    Location:158 → 356
    Galactosyl_T; Galactosyltransferase

  3. XM_048377246.1 → XP_048233203.1  probable beta-1,3-galactosyltransferase 2 isoform X4

  4. XM_048377245.1 → XP_048233202.1  probable beta-1,3-galactosyltransferase 2 isoform X3

  5. XM_048377247.1 → XP_048233204.1  probable beta-1,3-galactosyltransferase 2 isoform X4

  6. XM_015722399.3 → XP_015577885.1  probable beta-1,3-galactosyltransferase 2 isoform X3

    UniProtKB/TrEMBL
    B9SDX5
    Conserved Domains (3) summary
    PLN03193
    Location:1 → 370
    PLN03193; beta-1,3-galactosyltransferase; Provisional
    pfam13334
    Location:1 → 76
    DUF4094; Domain of unknown function (DUF4094)
    cl21608
    Location:115 → 313
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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