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GPC1 Glycerophosphocholine acyltransferase 1 [ Ricinus communis (castor bean) ]

Gene ID: 8272523, updated on 30-Nov-2023

Summary

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Gene symbol
GPC1
Gene description
Glycerophosphocholine acyltransferase 1
Locus tag
RCOM_1046270
Gene type
protein coding
RefSeq status
MODEL
Organism
Ricinus communis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
Also known as
GPCAT
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Genomic context

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See GPC1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
102 current ASM1957865v1 (GCF_019578655.1) 3 NC_063258.1 (28536593..28539644, complement)
101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994288.1 (158235..161306)

Chromosome 3 - NC_063258.1Genomic Context describing neighboring genes Neighboring gene threonine synthase 1, chloroplastic Neighboring gene myosin-17 Neighboring gene protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 Neighboring gene nifU-like protein 3, chloroplastic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in phosphatidylcholine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycerophosphocholine acyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1957865v1

Genomic

  1. NC_063258.1 Reference ASM1957865v1

    Range
    28536593..28539644 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025156481.2 → XP_025012249.2  glycerophosphocholine acyltransferase 1 isoform X2

  2. XM_025156482.2 → XP_025012250.2  glycerophosphocholine acyltransferase 1 isoform X3

  3. XM_002514040.4 → XP_002514086.2  glycerophosphocholine acyltransferase 1 isoform X1

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
B9RK42.1 GenPept UniProtKB/Swiss-Prot:B9RK42

Gene LinkOut

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