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LOC8271836 cellulose synthase A catalytic subunit 3 [UDP-forming] [ Ricinus communis (castor bean) ]

Gene ID: 8271836, updated on 30-Nov-2023

Summary

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Gene symbol
LOC8271836
Gene description
cellulose synthase A catalytic subunit 3 [UDP-forming]
Locus tag
RCOM_0493240
Gene type
protein coding
RefSeq status
MODEL
Organism
Ricinus communis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Genomic context

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Location:
chromosome: 6
Exon count:
16
Annotation release Status Assembly Chr Location
102 current ASM1957865v1 (GCF_019578655.1) 6 NC_063261.1 (13132769..13140317, complement)
101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994856.1 (61263..68789, complement)

Chromosome 6 - NC_063261.1Genomic Context describing neighboring genes Neighboring gene protein DETOXIFICATION 43 Neighboring gene uncharacterized LOC8271835 Neighboring gene uncharacterized LOC125370280 Neighboring gene cation/H(+) antiporter 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cellulose synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellulose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type primary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cellulose synthase A catalytic subunit 3 [UDP-forming]

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1957865v1

Genomic

  1. NC_063261.1 Reference ASM1957865v1

    Range
    13132769..13140317 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015727214.3 → XP_015582700.1  cellulose synthase A catalytic subunit 3 [UDP-forming]

    UniProtKB/TrEMBL
    B9T1P7
    Conserved Domains (3) summary
    PLN02638
    Location:1 → 1085
    PLN02638; cellulose synthase A (UDP-forming), catalytic subunit
    pfam14569
    Location:13 → 78
    zf-UDP; Zinc-binding RING-finger
    cl11394
    Location:526 → 835
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_015727213.3 → XP_015582699.1  cellulose synthase A catalytic subunit 3 [UDP-forming]

    UniProtKB/TrEMBL
    B9T1P7
    Conserved Domains (3) summary
    PLN02638
    Location:1 → 1085
    PLN02638; cellulose synthase A (UDP-forming), catalytic subunit
    pfam14569
    Location:13 → 78
    zf-UDP; Zinc-binding RING-finger
    cl11394
    Location:526 → 835
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_015727215.2 → XP_015582701.1  cellulose synthase A catalytic subunit 3 [UDP-forming]

    UniProtKB/TrEMBL
    B9T1P7
    Conserved Domains (3) summary
    PLN02638
    Location:1 → 1085
    PLN02638; cellulose synthase A (UDP-forming), catalytic subunit
    pfam14569
    Location:13 → 78
    zf-UDP; Zinc-binding RING-finger
    cl11394
    Location:526 → 835
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
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