U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

esterase/lipase/thioesterase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 826596, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
esterase/lipase/thioesterase family protein
Primary source
TAIR:AT4G10050
Locus tag
AT4G10050
See related
Araport:AT4G10050
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F28M11.4
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 4
Exon count:
13
Sequence:
Chromosome: 4; NC_003075.7 (6284308..6287293, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene hydroxysteroid dehydrogenase 5 Neighboring gene cytochrome c-2 Neighboring gene Beta-glucosidase, GBA2 type family protein Neighboring gene KH domain-containing protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Large-scale characterization of integral proteins from Arabidopsis vacuolar membrane by two-dimensional liquid chromatography. Szponarski W, et al. Proteomics, 2004 Feb. PMID 14760709
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help
NM_001340649.1
NM_117073.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein methylesterase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in vacuole HDA PubMed 

General protein information

Go to the top of the page Help
Preferred Names
esterase/lipase/thioesterase family protein
NP_567350.1
  • esterase/lipase/thioesterase family protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073), Protein phosphatase methylesterase, eukaryotic (InterPro:IPR016812); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    6284308..6287293 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117073.4 → NP_567350.1  esterase/lipase/thioesterase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567350.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V4A9, A0A654FMS2, Q94F26
    Conserved Domains (1) summary
    COG0596
    Location:69 → 328
    MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]

  2. NM_001340649.1 → NP_001328229.1  esterase/lipase/thioesterase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B432
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases
Research Materials
Tools