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LOC8265060 probable UDP-arabinopyranose mutase 2 [ Ricinus communis (castor bean) ]

Gene ID: 8265060, updated on 30-Nov-2023

Summary

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Gene symbol
LOC8265060
Gene description
probable UDP-arabinopyranose mutase 2
Locus tag
RCOM_1468610
Gene type
protein coding
RefSeq status
MODEL
Organism
Ricinus communis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Genomic context

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See LOC8265060 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
102 current ASM1957865v1 (GCF_019578655.1) 4 NC_063259.1 (24567579..24570393, complement)
101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994292.1 (828181..831025, complement)

Chromosome 4 - NC_063259.1Genomic Context describing neighboring genes Neighboring gene squamosa promoter-binding-like protein 6 Neighboring gene uncharacterized LOC107260917 Neighboring gene uncharacterized LOC125369714 Neighboring gene histone H4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable UDP-arabinopyranose mutase 2
Names
alpha-1,4-glucan-protein synthase [UDP-forming] 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1957865v1

Genomic

  1. NC_063259.1 Reference ASM1957865v1

    Range
    24567579..24570393 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002514580.3 → XP_002514626.1  probable UDP-arabinopyranose mutase 2

    See identical proteins and their annotated locations for XP_002514626.1

    UniProtKB/TrEMBL
    B9RLK7
    Conserved Domains (1) summary
    PLN03180
    Location:5 → 349
    PLN03180; reversibly glycosylated polypeptide; Provisional
Nucleotide Protein
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