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LOC8258251 probable galacturonosyltransferase 14 [ Ricinus communis (castor bean) ]

Gene ID: 8258251, updated on 30-Nov-2023

Summary

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Gene symbol
LOC8258251
Gene description
probable galacturonosyltransferase 14
Locus tag
RCOM_0524370
Gene type
protein coding
RefSeq status
MODEL
Organism
Ricinus communis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Genomic context

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See LOC8258251 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
102 current ASM1957865v1 (GCF_019578655.1) 5 NC_063260.1 (8860010..8868323, complement)
101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994487.1 (72261..80330, complement)

Chromosome 5 - NC_063260.1Genomic Context describing neighboring genes Neighboring gene chaperone protein ClpB3, chloroplastic Neighboring gene membrane-anchored ubiquitin-fold protein 2 Neighboring gene pentatricopeptide repeat-containing protein At5g39350 Neighboring gene protein FAR1-RELATED SEQUENCE 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1957865v1

Genomic

  1. NC_063260.1 Reference ASM1957865v1

    Range
    8860010..8868323 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002526033.4 → XP_002526079.2  probable galacturonosyltransferase 14

Nucleotide Protein
Heading Accession and Version

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Research Materials