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CPK27 calcium-dependent protein kinase 27 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 825805, updated on 18-Sep-2024

Summary

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Official Symbol
CPK27
Official Full Name
calcium-dependent protein kinase 27
Primary source
TAIR:AT4G04700
Locus tag
AT4G04700
See related
Araport:AT4G04700
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
calcium-dependent protein kinase 27; T4B21.21; T4B21_21
Summary
member of Calcium Dependent Protein Kinase
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Genomic context

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See CPK27 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
8
Sequence:
Chromosome: 4; NC_003075.7 (2385038..2388105, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene calcium-dependent protein kinase 31 Neighboring gene calcium-dependent kinase-like protein Neighboring gene calcium-dependent protein kinase 21

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
  2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_116708.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in plasma membrane HDA PubMed 
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
calcium-dependent protein kinase 27
NP_192379.2
  • calcium-dependent protein kinase 27 (CPK27); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 31 (TAIR:AT4G04695.1); Has 138423 Blast hits to 130316 proteins in 4788 species: Archae - 147; Bacteria - 14221; Metazoa - 51107; Fungi - 18194; Plants - 30674; Viruses - 497; Other Eukaryotes - 23583 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    2385038..2388105 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_116708.3 → NP_192379.2  calcium-dependent protein kinase 27 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192379.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9M103, Q9ZSA4
    UniProtKB/TrEMBL
    A0A178V3D5
    Conserved Domains (4) summary
    PTZ00184
    Location:325 → 468
    PTZ00184; calmodulin; Provisional
    smart00220
    Location:28 → 290
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd00051
    Location:411 → 469
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cd05117
    Location:28 → 289
    STKc_CAMK; The catalytic domain of CAMK family Serine/Threonine Kinases
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9ZSA4.3

Gene LinkOut

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