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FIB fibrillin [ Arabidopsis thaliana (thale cress) ]

Gene ID: 825714, updated on 18-Sep-2024

Summary

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Official Symbol
FIB
Official Full Name
fibrillin
Primary source
TAIR:AT4G04020
Locus tag
AT4G04020
See related
Araport:AT4G04020
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
FIB1a; fibrillin; fibrillin 1a; PGL35; plastoglobulin 35; T24H24.16; T24H24_16
Summary
Fibrillin precursor protein. The fibrillin preprotein, but not the mature protein interacts with ABI2. Regulated by abscisic acid response regulators. Involved in abscisic acid-mediated photoprotection.
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Genomic context

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See FIB in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Sequence:
Chromosome: 4; NC_003075.7 (1931883..1933950)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene transcription repressor Neighboring gene transcription repressor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The ABCs of time management. Wiley L. Nursing, 1978 Sep. PMID 249371
  2. Arabidopsis fibrillin 1-2 subfamily members exert their functions via specific protein-protein interactions. Torres-Romero D, et al. J Exp Bot, 2022 Jan 27. PMID 34651644, Free PMC Article
  3. Fibrillin2 in chloroplast plastoglobules participates in photoprotection and jasmonate-induced senescence. Kim I, et al. Plant Physiol, 2022 Jun 27. PMID 35404409, Free PMC Article
  4. Tissue-Specific Regulation of Plastid Protein Import via Transit-Peptide Motifs. Chu CC, et al. Plant Cell, 2020 Apr. PMID 32075863, Free PMC Article
  5. Plant lipid-associated fibrillin proteins condition jasmonate production under photosynthetic stress. Youssef A, et al. Plant J, 2010 Feb 1. PMID 19906042

See all (23) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_116640.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within photoinhibition IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within photoprotection IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within response to abscisic acid IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within response to cold IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in chloroplast stroma HDA PubMed 
located_in chloroplast thylakoid HDA PubMed 
located_in chloroplast thylakoid membrane HDA PubMed 
located_in cytosol HDA PubMed 
located_in nucleus HDA PubMed 
located_in plastid IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plastoglobule HDA PubMed 
located_in stromule IDA
Inferred from Direct Assay
more info
 PubMed 
located_in thylakoid HDA PubMed 
located_in thylakoid lumen HDA PubMed 

General protein information

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Preferred Names
fibrillin
NP_192311.1
  • fibrillin (FIB); FUNCTIONS IN: structural molecule activity; INVOLVED IN: photoinhibition, response to cold, response to abscisic acid stimulus; LOCATED IN: in 8 components; EXPRESSED IN: fruit, guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: Plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT4G22240.1); Has 435 Blast hits to 434 proteins in 78 species: Archae - 0; Bacteria - 75; Metazoa - 0; Fungi - 0; Plants - 340; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    1931883..1933950
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_116640.5 → NP_192311.1  fibrillin [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192311.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O81439
    UniProtKB/TrEMBL
    A0A178V0C8, A0A654FLZ8
    Conserved Domains (1) summary
    pfam04755
    Location:92 → 309
    PAP_fibrillin
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O81439.1

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