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O-fucosyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824577, updated on 18-Sep-2024

Summary

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Official Full Name
O-fucosyltransferase family protein
Primary source
TAIR:AT3G54100
Locus tag
AT3G54100
See related
Araport:AT3G54100
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
8
Sequence:
Chromosome: 3; NC_003074.8 (20033951..20038200, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene fructokinase-like 1 Neighboring gene ncRNA Neighboring gene plant uncoupling mitochondrial protein 1 Neighboring gene Reticulon family protein Neighboring gene Josephin family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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NM_115270.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables glycosyltransferase activity ISM
Inferred from Sequence Model
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
O-fucosyltransferase family protein
NP_190978.1
  • O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G37980.1); Has 847 Blast hits to 824 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 847; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    20033951..20038200 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_115270.5 → NP_190978.1  O-fucosyltransferase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_190978.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9M393
    UniProtKB/TrEMBL
    A0A178VLM0, A0A5S9XKS8, A0A654FFM2
    Conserved Domains (1) summary
    cd11299
    Location:225 → 546
    O-FucT_plant; GDP-fucose protein O-fucosyltransferase, plant specific subfamily
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9M393.1

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