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ACT3 actin 3 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824542, updated on 18-Sep-2024

Summary

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Official Symbol
ACT3
Official Full Name
actin 3
Primary source
TAIR:AT3G53750
Locus tag
AT3G53750
See related
Araport:AT3G53750
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
actin 3
Summary
Member of the Actin gene family. Expressed in mature pollen.
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Genomic context

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See ACT3 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Sequence:
Chromosome: 3; NC_003074.8 (19915257..19917775)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Histone superfamily protein Neighboring gene Ribosomal protein L36e family protein Neighboring gene GAMMA-TUBULIN COMPLEX PROTEIN 4 Neighboring gene late embryogenesis abundant 3 (LEA3) family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Conserved expression of the Arabidopsis ACT1 and ACT 3 actin subclass in organ primordia and mature pollen. An YQ, et al. Plant Cell, 1996 Jan. PMID 8597657, Free PMC Article
  2. Analysis of the Arabidopsis nuclear proteome and its response to cold stress. Bae MS, et al. Plant J, 2003 Dec. PMID 14617066
  3. Arabidopsis cell wall proteome defined using multidimensional protein identification technology. Bayer EM, et al. Proteomics, 2006 Jan. PMID 16287169
  4. Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. Ito J, et al. J Proteome Res, 2011 Apr 1. PMID 21166475
  5. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_115235.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables structural constituent of cytoskeleton ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within cytoskeleton organization ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
acts_upstream_of_or_within cytoskeleton organization TAS
Traceable Author Statement
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in cytoskeleton TAS
Traceable Author Statement
more info
  
located_in cytosol HDA PubMed 
NOT located_in cytosol RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
located_in nucleus HDA PubMed 
located_in plant-type cell wall HDA PubMed 
located_in plasmodesma HDA PubMed 

General protein information

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Preferred Names
actin 3
NP_566988.1
  • actin 3 (ACT3); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: cytoskeleton organization; LOCATED IN: cell wall, cytoskeleton, nucleus; EXPRESSED IN: male gametophyte, seed; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 1 (TAIR:AT2G37620.2); Has 15230 Blast hits to 14806 proteins in 3046 species: Archae - 8; Bacteria - 15; Metazoa - 5741; Fungi - 5229; Plants - 1611; Viruses - 2; Other Eukaryotes - 2624 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    19915257..19917775
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001339629.1 → NP_001326881.1  actin 3 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P0CJ46, P0CJ47, P10671, P53493, Q9M351
    UniProtKB/TrEMBL
    A0A178VSL1, A0A384LCZ9, F1LIM0, F1LIM1
    Conserved Domains (1) summary
    cl17037
    Location:5 → 377
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily

  2. NM_115235.4 → NP_566988.1  actin 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566988.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P0CJ46, P0CJ47, P10671, P53493, Q9M351
    UniProtKB/TrEMBL
    A0A178VSL1, A0A384LCZ9, F1LIM0, F1LIM1
    Conserved Domains (1) summary
    cl17037
    Location:5 → 377
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0CJ46.1
P0CJ47.1

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