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Phum_PHUM111230 uncharacterized protein [ Pediculus humanus corporis (human body louse) ]

Gene ID: 8238247, updated on 6-Jan-2024

Summary

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Gene symbol
Phum_PHUM111230
Gene description
uncharacterized protein
Locus tag
Phum_PHUM111230
See related
VectorBase:PHUM111230
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pediculus humanus corporis (strain: USDA, sub-species: corporis)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Psocodea; Phthiraptera; Anoplura; Pediculidae; Pediculus
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Genomic context

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See Phum_PHUM111230 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
10

NW_002987078.1Genomic Context describing neighboring genes Neighboring gene nnp-1 protein, putative Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_002987078.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_002424124.1
  • encoded by transcript Phum_PHUM111230-RA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_002987078.1 Reference assembly

    Range
    261177..265396 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002424079.1 → XP_002424124.1  uncharacterized protein Phum_PHUM111230 [Pediculus humanus corporis]

    See identical proteins and their annotated locations for XP_002424124.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E0VDD0
    Conserved Domains (5) summary
    smart00408
    Location:249 → 300
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:329 → 412
    IG_like; Immunoglobulin like
    pfam08205
    Location:42 → 132
    C2-set_2; CD80-like C2-set immunoglobulin domain
    pfam13927
    Location:156 → 218
    Ig_3; Immunoglobulin domain
    cl11960
    Location:317 → 412
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials