MYB30 myb domain protein 30 [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Gene symbol: MYB30
Gene description: myb domain protein 30
Primary source: Araport:AT3G28910
Locus tag: AT3G28910
See related: TAIR:AT3G28910
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: ATMYB30; myb domain protein 30
Summary: transcription factor myb homologue
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Genomic context

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See MYB30 in Genome Data Viewer

Location:: chromosome: 3

Exon count:: 3

Sequence:: Chromosome: 3; NC_003074.8 (10911132..10913190)

Chromosome 3 - NC_003074.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

MIW1 participates in ABA signaling through the regulation of MYB30 in Arabidopsis.
Title: MIW1 participates in ABA signaling through the regulation of MYB30 in Arabidopsis.
Actin Depolymerization Factor ADF1 Regulated by MYB30 Plays an Important Role in Plant Thermal Adaptation.
Title: Actin Depolymerization Factor ADF1 Regulated by MYB30 Plays an Important Role in Plant Thermal Adaptation.
MYB30 integrates light signals with antioxidant biosynthesis to regulate plant responses during postsubmergence recovery.
Title: MYB30 integrates light signals with antioxidant biosynthesis to regulate plant responses during postsubmergence recovery.
MYB30 and ETHYLENE INSENEITIVE3 antagonistically regulate root hair growth and phosphorus uptake under phosphate deficiency in Arabidopsis.
Title: MYB30 and ETHYLENE INSENEITIVE3 antagonistically regulate root hair growth and phosphorus uptake under phosphate deficiency in Arabidopsis.
MYB30 and ETHYLENE INSENSITIVE3 antagonistically modulate root hair growth in Arabidopsis.
Title: MYB30 and ETHYLENE INSENSITIVE3 antagonistically modulate root hair growth in Arabidopsis.
MYB30 Orchestrates Systemic Reactive Oxygen Signaling and Plant Acclimation.
Title: MYB30 Orchestrates Systemic Reactive Oxygen Signaling and Plant Acclimation.
MYB30 Is a Key Negative Regulator of Arabidopsis Photomorphogenic Development That Promotes PIF4 and PIF5 Protein Accumulation in the Light.
Title: MYB30 Is a Key Negative Regulator of Arabidopsis Photomorphogenic Development That Promotes PIF4 and PIF5 Protein Accumulation in the Light.
SUMOylation of MYB30 enhances salt tolerance by elevating alternative respiration via transcriptionally upregulating AOX1a in Arabidopsis.
Title: SUMOylation of MYB30 enhances salt tolerance by elevating alternative respiration via transcriptionally upregulating AOX1a in Arabidopsis.
Data show that the RING-type ubiquitin E3 ligase RHA2b, which positively regulates abscisic acid (ABA) signaling, interacted with and ubiquitinated transcription factor MYB30 to modulate MYB30 stability.
Title: The Ubiquitin E3 Ligase RHA2b Promotes Degradation of MYB30 in Abscisic Acid Signaling.
showed that MYB30 is necessary for root growth regulation during defense responses
Title: MYB30 links ROS signaling, root cell elongation, and plant immune responses.

Submit: New GeneRIF Correction See all GeneRIFs (20)

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Orthologs from OrthoDB

NM_001338974.1

Supported by ESTs:

NM_113812.5

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables DNA-binding transcription factor activity	IDA Inferred from Direct Assay more info	PubMed
enables DNA-binding transcription factor activity	ISS Inferred from Sequence or Structural Similarity more info	PubMed
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed
enables sequence-specific double-stranded DNA binding	IDA Inferred from Direct Assay more info	PubMed
enables transcription cis-regulatory region binding	IPI Inferred from Physical Interaction more info	PubMed

Process	Evidence Code	Pubs
acts_upstream_of_or_within negative regulation of photomorphogenesis	IMP Inferred from Mutant Phenotype more info	PubMed
acts_upstream_of_or_within plant-type hypersensitive response	IEP Inferred from Expression Pattern more info	PubMed
acts_upstream_of_or_within response to bacterium	IEP Inferred from Expression Pattern more info	PubMed
acts_upstream_of_or_within response to high light intensity	IMP Inferred from Mutant Phenotype more info	PubMed
acts_upstream_of_or_within response to hypoxia	IMP Inferred from Mutant Phenotype more info	PubMed
acts_upstream_of_or_within very long-chain fatty acid biosynthetic process	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	IDA Inferred from Direct Assay more info	PubMed
located_in nucleus	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: myb domain protein 30

NP_189533.1

myb domain protein 30 (MYB30); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 96 (TAIR:AT5G62470.2); Has 9437 Blast hits to 8283 proteins in 550 species: Archae - 0; Bacteria - 9; Metazoa - 928; Fungi - 510; Plants - 5797; Viruses - 10; Other Eukaryotes - 2183 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003074.8 Reference assembly

Range

10911132..10913190

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_113812.5 → NP_189533.1 myb domain protein 30 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_189533.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q9SCU7

UniProtKB/TrEMBL

A0A178VDU0, A0A5S9XGL5, A0A654FBL8

Conserved Domains (1) summary

PLN03212
Location:5 → 128

PLN03212; Transcription repressor MYB5; Provisional
NM_001338974.1 → NP_001326113.1 myb domain protein 30 [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1I9LNA4