U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Proline-rich extensin-like family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 822485, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
Proline-rich extensin-like family protein
Primary source
TAIR:AT3G28550
Locus tag
AT3G28550
See related
Araport:AT3G28550
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_003074.8 (10700562..10704018, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene UDP-glucose 4-epimerase Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene BCS1 AAA-type ATPase Neighboring gene ncRNA

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help
NM_113775.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables structural constituent of cell wall IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in plant-type cell wall organization IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Proline-rich extensin-like family protein
NP_189496.2
  • Proline-rich extensin-like family protein; FUNCTIONS IN: structural constituent of cell wall; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Extensin-like repeat (InterPro:IPR006706); BEST Arabidopsis thaliana protein match is: Proline-rich extensin-like family protein (TAIR:AT3G54580.1); Has 433536 Blast hits to 44790 proteins in 1795 species: Archae - 956; Bacteria - 66952; Metazoa - 162710; Fungi - 67978; Plants - 67619; Viruses - 11578; Other Eukaryotes - 55743 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    10700562..10704018 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001338959.1 → NP_001327211.1  Proline-rich extensin-like family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LRL7

  2. NM_113775.3 → NP_189496.2  Proline-rich extensin-like family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654FBS3, F4J0B5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools