ATPK7 Protein kinase superfamily protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Symbol: ATPK7
Official Full Name: Protein kinase superfamily protein
Primary source: TAIR:AT3G27580
Locus tag: AT3G27580
See related: Araport:AT3G27580
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: D6 PROTEIN KINASE LIKE 3; D6PKL3
Summary: a member of a subfamily of Ser/Thr PKs in plants.
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Genomic context

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See ATPK7 in Genome Data Viewer

Location:: chromosome: 3

Exon count:: 3

Sequence:: Chromosome: 3; NC_003074.8 (10217417..10220061, complement)

Chromosome 3 - NC_003074.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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NM_001035707.3

Supported by ESTs:

NM_113674.4

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables kinase activity	ISS Inferred from Sequence or Structural Similarity more info	PubMed
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed
enables protein kinase activity	IDA Inferred from Direct Assay more info	PubMed
enables protein kinase activity	TAS Traceable Author Statement more info	PubMed
enables protein serine/threonine kinase activity	ISS Inferred from Sequence or Structural Similarity more info	PubMed

Process	Evidence Code	Pubs
involved_in basipetal auxin transport	TAS Traceable Author Statement more info	PubMed
acts_upstream_of_or_within phototropism	IMP Inferred from Mutant Phenotype more info	PubMed
acts_upstream_of_or_within pollen aperture formation	IMP Inferred from Mutant Phenotype more info	PubMed
acts_upstream_of_or_within pollen development	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in protein phosphorylation	TAS Traceable Author Statement more info	PubMed

Component	Evidence Code	Pubs
located_in chloroplast	ISM Inferred from Sequence Model more info
located_in plasma membrane	IDA Inferred from Direct Assay more info	PubMed
located_in plasma membrane region	IDA Inferred from Direct Assay more info	PubMed

General protein information

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Preferred Names: Protein kinase superfamily protein

NP_001030784.1

ATPK7; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 2 (TAIR:AT5G47750.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NP_189395.1

ATPK7; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 2 (TAIR:AT5G47750.1); Has 118014 Blast hits to 91974 proteins in 2859 species: Archae - 52; Bacteria - 14000; Metazoa - 46533; Fungi - 13234; Plants - 22437; Viruses - 379; Other Eukaryotes - 21379 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003074.8 Reference assembly

Range

10217417..10220061 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_113674.4 → NP_189395.1 Protein kinase superfamily protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_189395.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q05999, Q67YR9

UniProtKB/TrEMBL

A0A178VEX9, A0A5S9XG81

Conserved Domains (1) summary

cd05574
Location:180 → 540

STKc_phototropin_like; Catalytic domain of Phototropin-like Serine/Threonine Kinases
NM_001035707.3 → NP_001030784.1 Protein kinase superfamily protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_001030784.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q05999, Q67YR9

UniProtKB/TrEMBL

A0A178VEX9, A0A5S9XG81

Conserved Domains (1) summary

cd05574
Location:180 → 540

STKc_phototropin_like; Catalytic domain of Phototropin-like Serine/Threonine Kinases