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LPP3 lipid phosphate phosphatase 3 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821299, updated on 18-Sep-2024

Summary

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Official Symbol
LPP3
Official Full Name
lipid phosphate phosphatase 3
Primary source
TAIR:AT3G02600
Locus tag
AT3G02600
See related
Araport:AT3G02600
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATLPP3; F16B3.23; F16B3_23; lipid phosphate phosphatase 3; LIPID PHOSPHATE PHOSPHATASE 3
Summary
Encodes phosphatidic acid phosphatase. Expressed during germination.
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Genomic context

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See LPP3 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
10
Sequence:
Chromosome: 3; NC_003074.8 (550975..554697)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene sterol 1 Neighboring gene Fatty acid hydroxylase superfamily protein Neighboring gene plant stearoyl-acyl-carrier desaturase family protein Neighboring gene Plant stearoyl-acyl-carrier-protein desaturase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Lipid phosphate phosphatases in Arabidopsis. Regulation of the AtLPP1 gene in response to stress. Pierrugues O, et al. J Biol Chem, 2001 Jun 8. PMID 11278556
  2. Identification of new intrinsic proteins in Arabidopsis plasma membrane proteome. Marmagne A, et al. Mol Cell Proteomics, 2004 Jul. PMID 15060130
  3. A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. Marmagne A, et al. Mol Cell Proteomics, 2007 Nov. PMID 17644812
  4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001084626.2
NM_001084627.1
NM_001084628.2
NM_001084629.2
NM_001337419.1
NM_001337420.1
NM_001337421.1
NM_001337422.1
NM_001337423.1
NM_001337424.1
NM_001337425.1
NM_111128.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables phosphatidate phosphatase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within phospholipid metabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane HDA PubMed 

General protein information

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Preferred Names
lipid phosphate phosphatase 3
NP_001078095.1
  • lipid phosphate phosphatase 3 (LPP3); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase 1 (TAIR:AT2G01180.1); Has 2093 Blast hits to 2088 proteins in 398 species: Archae - 13; Bacteria - 367; Metazoa - 924; Fungi - 390; Plants - 200; Viruses - 7; Other Eukaryotes - 192 (source: NCBI BLink).
NP_001078096.1
  • lipid phosphate phosphatase 3 (LPP3); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase 1 (TAIR:AT2G01180.1); Has 2087 Blast hits to 2082 proteins in 396 species: Archae - 13; Bacteria - 367; Metazoa - 921; Fungi - 397; Plants - 200; Viruses - 3; Other Eukaryotes - 186 (source: NCBI BLink).
NP_001078098.1
  • lipid phosphate phosphatase 3 (LPP3); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase 1 (TAIR:AT2G01180.1); Has 2087 Blast hits to 2082 proteins in 396 species: Archae - 13; Bacteria - 367; Metazoa - 921; Fungi - 397; Plants - 200; Viruses - 3; Other Eukaryotes - 186 (source: NCBI BLink).
NP_001319453.1
  • lipid phosphate phosphatase 3 (LPP3); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase 1 (TAIR:AT2G01180.1); Has 2087 Blast hits to 2082 proteins in 396 species: Archae - 13; Bacteria - 367; Metazoa - 921; Fungi - 397; Plants - 200; Viruses - 3; Other Eukaryotes - 186 (source: NCBI BLink).
NP_566177.1
  • lipid phosphate phosphatase 3 (LPP3); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: phosphatidic acid phosphatase 1 (TAIR:AT2G01180.1); Has 2088 Blast hits to 2083 proteins in 396 species: Archae - 13; Bacteria - 367; Metazoa - 922; Fungi - 397; Plants - 200; Viruses - 3; Other Eukaryotes - 186 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    550975..554697
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001084629.2 → NP_001078098.1  lipid phosphate phosphatase 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078098.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VDY7, A0A178VF41, A0A384LE78, F4IX65
    Conserved Domains (1) summary
    PLN02731
    Location:1 → 314
    PLN02731; Putative lipid phosphate phosphatase

  2. NM_001337421.1 → NP_001319453.1  lipid phosphate phosphatase 3 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VDY7, A0A178VF41, A0A384LE78, F4IX65
    Conserved Domains (1) summary
    PLN02731
    Location:1 → 314
    PLN02731; Putative lipid phosphate phosphatase

  3. NM_001337422.1 → NP_001327800.1  lipid phosphate phosphatase 3 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VDY7, A0A178VF41, A0A384LE78, F4IX65
    Conserved Domains (1) summary
    PLN02731
    Location:1 → 314
    PLN02731; Putative lipid phosphate phosphatase

  4. NM_001337423.1 → NP_001327797.1  lipid phosphate phosphatase 3 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VDY7, A0A178VF41, A0A384LE78, F4IX65
    Conserved Domains (1) summary
    PLN02731
    Location:1 → 314
    PLN02731; Putative lipid phosphate phosphatase

  5. NM_111128.2 → NP_566177.1  lipid phosphate phosphatase 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566177.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A8MR10, Q8LFD1, Q9M882
    UniProtKB/TrEMBL
    A0A5S9X8H7, A0A654F3H4
    Conserved Domains (1) summary
    PLN02731
    Location:1 → 364
    PLN02731; Putative lipid phosphate phosphatase

  6. NM_001084626.2 → NP_001078095.1  lipid phosphate phosphatase 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078095.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VF41
    Conserved Domains (1) summary
    PLN02731
    Location:1 → 333
    PLN02731; Putative lipid phosphate phosphatase

  7. NM_001337425.1 → NP_001327799.1  lipid phosphate phosphatase 3 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VDY7, A0A178VF41, A0A384LE78, F4IX65
    Conserved Domains (1) summary
    PLN02731
    Location:1 → 314
    PLN02731; Putative lipid phosphate phosphatase

  8. NM_001337424.1 → NP_001327798.1  lipid phosphate phosphatase 3 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VDY7, A0A178VF41, A0A384LE78, F4IX65
    Conserved Domains (1) summary
    PLN02731
    Location:1 → 314
    PLN02731; Putative lipid phosphate phosphatase

  9. NM_001337419.1 → NP_001327801.1  lipid phosphate phosphatase 3 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VDY7, A0A178VF41, A0A384LE78, F4IX65
    Conserved Domains (1) summary
    PLN02731
    Location:1 → 314
    PLN02731; Putative lipid phosphate phosphatase

  10. NM_001337420.1 → NP_001327802.1  lipid phosphate phosphatase 3 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VDY7, A0A178VF41, A0A384LE78, F4IX65
    Conserved Domains (1) summary
    PLN02731
    Location:1 → 314
    PLN02731; Putative lipid phosphate phosphatase

  11. NM_001084628.2 → NP_001078097.1  lipid phosphate phosphatase 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078097.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VDY7, A0A178VF41, A0A384LE78, F4IX65
    Conserved Domains (1) summary
    PLN02731
    Location:1 → 314
    PLN02731; Putative lipid phosphate phosphatase

  12. NM_001084627.1 → NP_001078096.1  lipid phosphate phosphatase 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078096.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VDY7, A0A178VF41, A0A384LE78, F4IX65
    Conserved Domains (1) summary
    PLN02731
    Location:1 → 314
    PLN02731; Putative lipid phosphate phosphatase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8LFD1.1

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