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CA1 carbonic anhydrase 1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821134, updated on 18-Sep-2024

Summary

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Official Symbol
CA1
Official Full Name
carbonic anhydrase 1
Primary source
TAIR:AT3G01500
Locus tag
AT3G01500
See related
Araport:AT3G01500
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS THALIANA SALICYLIC ACID-BINDING PROTEIN 3; ATBCA1; ATSABP3; BETA CARBONIC ANHYDRASE 1; carbonic anhydrase 1; F4P13.5; F4P13_5; SABP3; SALICYLIC ACID-BINDING PROTEIN 3
Summary
Encodes a putative beta-carbonic anhydrase betaCA1. Together with betaCA4 (At1g70410) regulates CO2-controlled stomatal movements in guard cells.
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Genomic context

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See CA1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
10
Sequence:
Chromosome: 3; NC_003074.8 (194426..198664, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene homeobox 1 Neighboring gene cyclophilin 38 Neighboring gene Protein kinase superfamily protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Thiol Redox Regulation of Plant β-Carbonic Anhydrase. Dreyer A, et al. Biomolecules, 2020 Jul 30. PMID 32751472, Free PMC Article
  2. Potyviral Gene-Silencing Suppressor HCPro Interacts with Salicylic Acid (SA)-Binding Protein 3 to Weaken SA-Mediated Defense Responses. Poque S, et al. Mol Plant Microbe Interact, 2018 Jan. PMID 29090655
  3. S-nitrosylation of AtSABP3 antagonizes the expression of plant immunity. Wang YQ, et al. J Biol Chem, 2009 Jan 23. PMID 19017644
  4. Reduction of plastid-localized carbonic anhydrase activity results in reduced Arabidopsis seedling survivorship. Ferreira FJ, et al. Plant Physiol, 2008 Jun. PMID 18434607, Free PMC Article
  5. Arabidopsis plastid carbonic anhydrase βCA5 is important for normal plant growth. Weerasooriya HN, et al. Plant Physiol, 2022 Nov 28. PMID 36149291, Free PMC Article

See all (33) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Thiol Redox Regulation of Plant beta-Carbonic Anhydrase.
    Title: Thiol Redox Regulation of Plant β-Carbonic Anhydrase.
  2. Carbonic anhydrases CA1 and CA4 function in atmospheric CO2-modulated disease resistance.
    Title: Carbonic anhydrases CA1 and CA4 function in atmospheric CO(2)-modulated disease resistance.
  3. the direct in vivo interaction between Turnip mosaic virus (TuMV) HCPro and the Arabidopsis homologue of SABP3, AtCA1, is reported.
    Title: Potyviral Gene-Silencing Suppressor HCPro Interacts with Salicylic Acid (SA)-Binding Protein 3 to Weaken SA-Mediated Defense Responses.
  4. Trole of AT3G01500 in the carbon dioxide mediated control of stomatal movements and its specific location in native guard cell chloroplasts
    Title: Distinct Cellular Locations of Carbonic Anhydrases Mediate Carbon Dioxide Control of Stomatal Movements.
  5. Inhibition of AtSBAP3 CA function by S-nitrosylation could contribute to a negative feedback loop that modulates the plant defense response. [AtSABP3]
    Title: S-nitrosylation of AtSABP3 antagonizes the expression of plant immunity.
Submit: New GeneRIF Correction

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001337342.1
NM_111016.4
NM_180159.2
NM_180160.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables carbonate dehydratase activity IEA
Inferred from Electronic Annotation
more info
  
enables carbonate dehydratase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables mRNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in carbon utilization IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within defense response to fungus IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within negative regulation of stomatal complex development IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in photosynthesis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within regulation of stomatal movement IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within response to carbon dioxide IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within response to cold IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in apoplast HDA PubMed 
located_in chloroplast HDA PubMed 
located_in chloroplast IDA
Inferred from Direct Assay
more info
 PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in chloroplast envelope HDA PubMed 
located_in chloroplast stroma HDA PubMed 
located_in chloroplast thylakoid membrane HDA PubMed 
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in cytosol HDA PubMed 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in stromule IDA
Inferred from Direct Assay
more info
 PubMed 
located_in thylakoid HDA PubMed 

General protein information

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Preferred Names
carbonic anhydrase 1
NP_186799.2
  • carbonic anhydrase 1 (CA1); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: in 8 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: carbonic anhydrase 2 (TAIR:AT5G14740.1); Has 5061 Blast hits to 5044 proteins in 1509 species: Archae - 36; Bacteria - 3893; Metazoa - 59; Fungi - 207; Plants - 363; Viruses - 0; Other Eukaryotes - 503 (source: NCBI BLink).
NP_850490.1
  • carbonic anhydrase 1 (CA1); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: in 8 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: carbonic anhydrase 2 (TAIR:AT5G14740.1); Has 5133 Blast hits to 5116 proteins in 1526 species: Archae - 36; Bacteria - 3970; Metazoa - 59; Fungi - 207; Plants - 361; Viruses - 0; Other Eukaryotes - 500 (source: NCBI BLink).
NP_850491.1
  • carbonic anhydrase 1 (CA1); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: carbonic anhydrase 2 (TAIR:AT5G14740.1); Has 5138 Blast hits to 5121 proteins in 1526 species: Archae - 36; Bacteria - 3970; Metazoa - 59; Fungi - 207; Plants - 363; Viruses - 0; Other Eukaryotes - 503 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    194426..198664 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111016.4 → NP_186799.2  carbonic anhydrase 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_186799.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P27140, Q0WWA9, Q56WK1, Q8RWW2, Q93VR8
    UniProtKB/TrEMBL
    A0A178VK19, A0A5S9X867, C0Z272
    Conserved Domains (1) summary
    PLN03014
    Location:1 → 347
    PLN03014; carbonic anhydrase

  2. NM_001337342.1 → NP_001326777.1  carbonic anhydrase 1 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LQB3, Q56X90

  3. NM_180160.4 → NP_850491.1  carbonic anhydrase 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850491.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VLF2, C0Z272
    Conserved Domains (1) summary
    PLN03014
    Location:1 → 336
    PLN03014; carbonic anhydrase

  4. NM_180159.2 → NP_850490.1  carbonic anhydrase 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850490.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q56X90
    Conserved Domains (1) summary
    cl00391
    Location:1 → 251
    beta_CA; Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P27140.2

Gene LinkOut

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