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serine/arginine repetitive matrix protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820742, updated on 18-Sep-2024

Summary

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Official Full Name
serine/arginine repetitive matrix protein
Primary source
TAIR:AT3G15115
Locus tag
AT3G15115
See related
Araport:AT3G15115
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_003074.8 (5085992..5087496, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Serine/Threonine-kinase pakA-like protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713
  2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

GeneRIFs: Gene References Into Functions

General gene information

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NM_112374.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
serine/arginine repetitive matrix protein
NP_566501.1
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53180.1); Has 47 Blast hits to 47 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    5085992..5087496 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_112374.3 → NP_566501.1  serine/arginine repetitive matrix protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566501.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VJE2, A0A384LLT5, A0A654F7C0, Q9LIM3
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases
Research Materials