U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CAX9 cation exchanger 9 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820622, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
CAX9
Official Full Name
cation exchanger 9
Primary source
TAIR:AT3G14070
Locus tag
AT3G14070
See related
Araport:AT3G14070
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATCCX3; CATION CALCIUM EXCHANGER 3; cation exchanger 9; CCX3; MAG2.9
Summary
Involved in cation (K, Na and Mn) homeostasis and transport
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CAX9 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_003074.8 (4660944..4663363, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene RELA/SPOT homolog 2 Neighboring gene uncharacterized protein Neighboring gene Subtilase family protein Neighboring gene Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3 Neighboring gene Small nuclear ribonucleoprotein family protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. AtCCX3 is an Arabidopsis endomembrane H+ -dependent K+ transporter. Morris J, et al. Plant Physiol, 2008 Nov. PMID 18775974, Free PMC Article
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables manganese ion transmembrane transporter activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables monoatomic cation transmembrane transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables monoatomic cation transmembrane transporter activity IGI
Inferred from Genetic Interaction
more info
 PubMed 
enables potassium ion transmembrane transporter activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables sodium ion transmembrane transporter activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within intracellular monoatomic cation homeostasis IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within response to cation stress IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic vesicle membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in endomembrane system IDA
Inferred from Direct Assay
more info
 PubMed 
located_in vacuolar membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in vacuole IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cation exchanger 9
NP_566474.1
  • cation exchanger 9 (CAX9); CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837); BEST Arabidopsis thaliana protein match is: cation calcium exchanger 4 (TAIR:AT1G54115.1); Has 3863 Blast hits to 3216 proteins in 856 species: Archae - 67; Bacteria - 789; Metazoa - 1939; Fungi - 299; Plants - 225; Viruses - 0; Other Eukaryotes - 544 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    4660944..4663363 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_112262.2 → NP_566474.1  cation exchanger 9 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566474.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LJI2
    UniProtKB/TrEMBL
    A0A5S9XBY7, A0A7G2EKS5
    Conserved Domains (1) summary
    PLN03151
    Location:1 → 643
    PLN03151; cation/calcium exchanger; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LJI2.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools