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PAS_chr4_0659 Subunit of the RNA polymerase II mediator complex [ Komagataella phaffii GS115 ]

Gene ID: 8201366, updated on 23-Nov-2023

Summary

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Gene symbol
PAS_chr4_0659
Gene description
Subunit of the RNA polymerase II mediator complex
Locus tag
PAS_chr4_0659
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Komagataella phaffii GS115 (strain: GS115)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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Genomic context

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See PAS_chr4_0659 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_012966.1 (1276014..1276891)

Chromosome 4 - NC_012966.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Nuclear pore complex subunit, part of a subcomplex also containing Nup53p, Nup170p, and Pse1p Neighboring gene Hypothetical protein Neighboring gene Hypothetical protein Neighboring gene 66S preribosome component MAK16 Neighboring gene Aminophospholipid translocase (flippase) that maintains membrane lipid asymmetry in post-Golgi secre

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012966.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Subunit of the RNA polymerase II mediator complex

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012966.1 Reference assembly

    Range
    1276014..1276891
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002494051.1 → XP_002494096.1  Subunit of the RNA polymerase II mediator complex [Komagataella phaffii GS115]

    See identical proteins and their annotated locations for XP_002494096.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C4R8J2, F2QYK3
    Conserved Domains (1) summary
    pfam08612
    Location:1 → 270
    Med20; TATA-binding related factor (TRF) of subunit 20 of Mediator complex
Nucleotide Protein
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