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PAS_chr4_0828 Myo-inositol transporter with strong similarity to the minor myo-inositol transporter Itr2p [ Komagataella phaffii GS115 ]

Gene ID: 8201228, updated on 23-Nov-2023

Summary

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Gene symbol
PAS_chr4_0828
Gene description
Myo-inositol transporter with strong similarity to the minor myo-inositol transporter Itr2p
Locus tag
PAS_chr4_0828
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Komagataella phaffii GS115 (strain: GS115)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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Genomic context

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See PAS_chr4_0828 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_012966.1 (1559358..1561235)

Chromosome 4 - NC_012966.1Genomic Context describing neighboring genes Neighboring gene RNA polymerase subunit, common to RNA polymerase I and III Neighboring gene Hypothetical protein Neighboring gene uncharacterized protein Neighboring gene Kynurenine 3-mono oxygenase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012966.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables myo-inositol:proton symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Myo-inositol transporter with strong similarity to the minor myo-inositol transporter Itr2p

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012966.1 Reference assembly

    Range
    1559358..1561235
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002494231.1 → XP_002494276.1  Myo-inositol transporter with strong similarity to the minor myo-inositol transporter Itr2p [Komagataella phaffii GS115]

    See identical proteins and their annotated locations for XP_002494276.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C4R922, F2QY21
    Conserved Domains (1) summary
    pfam00083
    Location:109 → 566
    Sugar_tr; Sugar (and other) transporter
Nucleotide Protein
Heading Accession and Version

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