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PAS_chr4_0913 uncharacterized protein [ Komagataella phaffii GS115 ]

Gene ID: 8201129, updated on 23-Nov-2023

Summary

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Gene symbol
PAS_chr4_0913
Gene description
uncharacterized protein
Locus tag
PAS_chr4_0913
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Komagataella phaffii GS115 (strain: GS115)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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Genomic context

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See PAS_chr4_0913 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_012966.1 (80071..81623)

Chromosome 4 - NC_012966.1Genomic Context describing neighboring genes Neighboring gene Putative helicase Neighboring gene Protein kinase involved in the response to oxidative and osmotic stress Neighboring gene Translational elongation factor 3, stimulates the binding of aminoacyl-tRNA (AA-tRNA) to ribosomes Neighboring gene Meiosis-specific protein with similarity to phospholipase B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012966.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloaminopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in fungal-type vacuole IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012966.1 Reference assembly

    Range
    80071..81623
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002493397.1 → XP_002493442.1  uncharacterized protein PAS_chr4_0913 [Komagataella phaffii GS115]

    See identical proteins and their annotated locations for XP_002493442.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1G4KR20, C4R6N8
    Conserved Domains (1) summary
    cd05658
    Location:25 → 493
    M18_DAP; M18 Peptidase Aspartyl aminopeptidase
Nucleotide Protein
Heading Accession and Version

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