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PAS_chr4_0197 Small subunit of the ribonucleotide-diphosphate reductase (RNR) complex [ Komagataella phaffii GS115 ]

Gene ID: 8201104, updated on 23-Nov-2023

Summary

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Gene symbol
PAS_chr4_0197
Gene description
Small subunit of the ribonucleotide-diphosphate reductase (RNR) complex
Locus tag
PAS_chr4_0197
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Komagataella phaffii GS115 (strain: GS115)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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Genomic context

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See PAS_chr4_0197 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_012966.1 (404230..405432, complement)

Chromosome 4 - NC_012966.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene C-8 sterol isomerase Neighboring gene Cytoplasmic component of the nuclear aminoacylation-dependent tRNA export pathway

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012966.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in deoxyribonucleotide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Small subunit of the ribonucleotide-diphosphate reductase (RNR) complex

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012966.1 Reference assembly

    Range
    404230..405432 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002493557.1 → XP_002493602.1  Small subunit of the ribonucleotide-diphosphate reductase (RNR) complex [Komagataella phaffii GS115]

    See identical proteins and their annotated locations for XP_002493602.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C4R748, F2QZY7
    Conserved Domains (1) summary
    cl00264
    Location:76 → 400
    Ferritin_like; Ferritin-like superfamily of diiron-containing four-helix-bundle proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials