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PAS_chr4_0255 Hypothetical protein [ Komagataella phaffii GS115 ]

Gene ID: 8200924, updated on 23-Nov-2023

Summary

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Gene symbol
PAS_chr4_0255
Gene description
Hypothetical protein
Locus tag
PAS_chr4_0255
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Komagataella phaffii GS115 (strain: GS115)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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Genomic context

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See PAS_chr4_0255 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_012966.1 (515603..516178, complement)

Chromosome 4 - NC_012966.1Genomic Context describing neighboring genes Neighboring gene Mitochondrial ribosome recycling factor Neighboring gene uncharacterized protein Neighboring gene Essential protein required for the accumulation of box C/D snoRNA Neighboring gene uncharacterized protein Neighboring gene Essential component of the Rix1 complex (with Rix1p and Ipi3p)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012966.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of vacuolar proton-transporting V-type ATPase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012966.1 Reference assembly

    Range
    515603..516178 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002493620.1 → XP_002493665.1  Hypothetical protein PAS_chr4_0255 [Komagataella phaffii GS115]

    See identical proteins and their annotated locations for XP_002493665.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C4R7B1
    Conserved Domains (1) summary
    cl03922
    Location:27 → 111
    V-ATPase_G; Vacuolar (H+)-ATPase G subunit
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases
Research Materials