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PAS_chr4_0234 Integral membrane protein of the early Golgi apparatus and endoplasmic reticulum [ Komagataella phaffii GS115 ]

Gene ID: 8200905, updated on 23-Nov-2023

Summary

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Gene symbol
PAS_chr4_0234
Gene description
Integral membrane protein of the early Golgi apparatus and endoplasmic reticulum
Locus tag
PAS_chr4_0234
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Komagataella phaffii GS115 (strain: GS115)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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Genomic context

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See PAS_chr4_0234 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_012966.1 (473963..474634)

Chromosome 4 - NC_012966.1Genomic Context describing neighboring genes Neighboring gene Protein with carboxyl methyl esterase activity Neighboring gene Glutamine-dependent NAD(+) synthetase Neighboring gene Hypothetical protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012966.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables COPII receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Integral membrane protein of the early Golgi apparatus and endoplasmic reticulum

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012966.1 Reference assembly

    Range
    473963..474634
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002493599.1 → XP_002493644.1  Integral membrane protein of the early Golgi apparatus and endoplasmic reticulum [Komagataella phaffii GS115]

    See identical proteins and their annotated locations for XP_002493644.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1G4KQX2, C4R790
    Conserved Domains (1) summary
    pfam04148
    Location:2 → 197
    Erv26; Transmembrane adaptor Erv26
Nucleotide Protein
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