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PAS_chr4_0565 Hypothetical protein [ Komagataella phaffii GS115 ]

Gene ID: 8200833, updated on 23-Nov-2023

Summary

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Gene symbol
PAS_chr4_0565
Gene description
Hypothetical protein
Locus tag
PAS_chr4_0565
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Komagataella phaffii GS115 (strain: GS115)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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Genomic context

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See PAS_chr4_0565 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_012966.1 (1105696..1106493)

Chromosome 4 - NC_012966.1Genomic Context describing neighboring genes Neighboring gene Subunit of the exosome, which is an essential complex present in both nucleus and cytoplasm Neighboring gene Phosphatidylinositol transfer protein (PITP) Neighboring gene Subunit of both RNase MRP and nuclear RNase P Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012966.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of elongin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012966.1 Reference assembly

    Range
    1105696..1106493
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002493960.1 → XP_002494005.1  Hypothetical protein PAS_chr4_0565 [Komagataella phaffii GS115]

    See identical proteins and their annotated locations for XP_002494005.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C4R8A1, F2QYU6
    Conserved Domains (1) summary
    pfam06881
    Location:26 → 128
    Elongin_A; RNA polymerase II transcription factor SIII (Elongin) subunit A
Nucleotide Protein
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