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PAS_chr4_0395 Essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p) [ Komagataella phaffii GS115 ]

Gene ID: 8200679, updated on 23-Nov-2023

Summary

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Gene symbol
PAS_chr4_0395
Gene description
Essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p)
Locus tag
PAS_chr4_0395
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Komagataella phaffii GS115 (strain: GS115)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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Genomic context

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See PAS_chr4_0395 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_012966.1 (792686..794680)

Chromosome 4 - NC_012966.1Genomic Context describing neighboring genes Neighboring gene Cytosolic leucyl tRNA synthetase, ligates leucine to the appropriate tRNA Neighboring gene Poly(A)RNA binding protein involved in nuclear mRNA export Neighboring gene Heme-binding protein involved in regulation of cytochrome P450 protein Erg11p Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012966.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SRP-dependent cotranslational protein targeting to membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in post-translational protein targeting to endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Sec62/Sec63 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012966.1 Reference assembly

    Range
    792686..794680
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002493779.1 → XP_002493824.1  Essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p) [Komagataella phaffii GS115]

    See identical proteins and their annotated locations for XP_002493824.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C4R7S0, F2QZC4
    Conserved Domains (1) summary
    cl28246
    Location:5 → 660
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
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