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PAS_chr4_0709 Cytoplasmic isoleucine-tRNA synthetase, target of the G1-specific inhibitor reveromycin A [ Komagataella phaffii GS115 ]

Gene ID: 8200604, updated on 23-Nov-2023

Summary

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Gene symbol
PAS_chr4_0709
Gene description
Cytoplasmic isoleucine-tRNA synthetase, target of the G1-specific inhibitor reveromycin A
Locus tag
PAS_chr4_0709
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Komagataella phaffii GS115 (strain: GS115)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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Genomic context

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See PAS_chr4_0709 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_012966.1 (1357436..1360654)

Chromosome 4 - NC_012966.1Genomic Context describing neighboring genes Neighboring gene Protein required for mitochondrial translation Neighboring gene Hypothetical protein Neighboring gene Hypothetical protein Neighboring gene Component of the nuclear pore complex Neighboring gene Hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012966.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aminoacyl-tRNA editing activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables isoleucine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isoleucyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Cytoplasmic isoleucine-tRNA synthetase, target of the G1-specific inhibitor reveromycin A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012966.1 Reference assembly

    Range
    1357436..1360654
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002494104.1 → XP_002494149.1  Cytoplasmic isoleucine-tRNA synthetase, target of the G1-specific inhibitor reveromycin A [Komagataella phaffii GS115]

    See identical proteins and their annotated locations for XP_002494149.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C4R8P5, F2QYF1
    Conserved Domains (1) summary
    PLN02882
    Location:8 → 1069
    PLN02882; aminoacyl-tRNA ligase
Nucleotide Protein
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