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PAS_chr3_0929 Protein required for beta-1,6 glucan biosynthesis [ Komagataella phaffii GS115 ]

Gene ID: 8200281, updated on 25-Jan-2024

Summary

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Gene symbol
PAS_chr3_0929
Gene description
Protein required for beta-1,6 glucan biosynthesis
Locus tag
PAS_chr3_0929
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Komagataella phaffii GS115 (strain: GS115)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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Genomic context

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See PAS_chr3_0929 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_012965.1 (1810921..1815273)

Chromosome 3 - NC_012965.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Mitochondrial ATP-binding protein, possibly a mitochondrial chaperone with non-proteolytic function Neighboring gene Membrane protein Neighboring gene Phosphoinositide binding protein required for vesicle formation in autophagy

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012965.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucose:glycoprotein glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Protein required for beta-1,6 glucan biosynthesis

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012965.1 Reference assembly

    Range
    1810921..1815273
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002493123.1 → XP_002493168.1  Protein required for beta-1,6 glucan biosynthesis [Komagataella phaffii GS115]

    See identical proteins and their annotated locations for XP_002493168.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C4R603, F2QUY5
    Conserved Domains (2) summary
    cd06432
    Location:1164 → 1412
    GT8_HUGT1_C_like; The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family
    pfam06427
    Location:21 → 1127
    UDP-g_GGTase; UDP-glucose:Glycoprotein Glucosyltransferase
Nucleotide Protein
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