U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PAS_chr2-1_0263 Catalytic subunit of 1,3-beta-D-glucan synthase [ Komagataella phaffii GS115 ]

Gene ID: 8198812, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
PAS_chr2-1_0263
Gene description
Catalytic subunit of 1,3-beta-D-glucan synthase
Locus tag
PAS_chr2-1_0263
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Komagataella phaffii GS115 (strain: GS115)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PAS_chr2-1_0263 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_012964.1 (494748..500015)

Chromosome 2 - NC_012964.1Genomic Context describing neighboring genes Neighboring gene Activator of Chs3p (chitin synthase III), recruits Chs3p to the bud neck via interaction with Bni4p Neighboring gene uncharacterized protein Neighboring gene Mitochondrial outer membrane protein with similarity to Tom70p Neighboring gene Protein that inhibits activation of Gcn2p, an eIF2 alpha subunit protein kinase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_012964.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fungal-type cell wall polysaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
Catalytic subunit of 1,3-beta-D-glucan synthase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012964.1 Reference assembly

    Range
    494748..500015
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002491110.1 → XP_002491155.1  Catalytic subunit of 1,3-beta-D-glucan synthase [Komagataella phaffii GS115]

    See identical proteins and their annotated locations for XP_002491155.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C4R051, F2QTJ3
    Conserved Domains (2) summary
    pfam02364
    Location:701 → 1508
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam14288
    Location:192 → 296
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials