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PAS_chr1-1_0393 Chitin synthase I [ Komagataella phaffii GS115 ]

Gene ID: 8196523, updated on 26-Jun-2024

Summary

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Gene symbol
PAS_chr1-1_0393
Gene description
Chitin synthase I
Locus tag
PAS_chr1-1_0393
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Komagataella phaffii GS115 (strain: GS115)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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Genomic context

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See PAS_chr1-1_0393 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_012963.1 (1286615..1289476, complement)

Chromosome 1 - NC_012963.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Mitochondrial asparaginyl-tRNA synthetase Neighboring gene Hypothetical protein with low sequence identity to Pdc1p Neighboring gene Nucleotide pyrophosphatase/phosphodiesterase family member

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012963.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Chitin synthase I

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012963.1 Reference assembly

    Range
    1286615..1289476 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002490006.1 → XP_002490051.1  Chitin synthase I [Komagataella phaffii GS115]

    See identical proteins and their annotated locations for XP_002490051.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C4QWZ7, F2QMQ0
    Conserved Domains (3) summary
    COG1215
    Location:397 → 722
    BcsA; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]
    pfam01644
    Location:284 → 448
    Chitin_synth_1; Chitin synthase
    pfam08407
    Location:212 → 283
    Chitin_synth_1N; Chitin synthase N-terminal
Nucleotide Protein
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