PGAZAT polygalacturonase ADPG2-like protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

Gene symbol: PGAZAT
Gene description: polygalacturonase ADPG2-like protein
Primary source: Araport:AT2G41850
Locus tag: AT2G41850
See related: TAIR:AT2G41850
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: ADPG2; ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE 2; polygalacturonase abscission zone A. thaliana; T11A7.5; T11A7_5
Summary: ADPG2.
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Chromosome 2 - NC_003071.7 Genomic Context describing neighboring genes

Go to nucleotide: Graphics FASTA GenBank

ADPG1 and ADPG2 are essential for silique dehiscence. In addition, ADPG2 and QRT2 contribute to floral organ abscission.
Title: ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE1 (ADPG1), ADPG2, and QUARTET2 are Polygalacturonases required for cell separation during reproductive development in Arabidopsis.

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NM_180028.3

Function	Evidence Code	Pubs
enables polygalacturonase activity	IDA Inferred from Direct Assay more info	PubMed

Process	Evidence Code	Pubs
acts_upstream_of_or_within anther dehiscence	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in carbohydrate metabolic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within cell wall modification involved in abscission	TAS Traceable Author Statement more info	PubMed
acts_upstream_of_or_within floral organ abscission	IMP Inferred from Mutant Phenotype more info	PubMed
acts_upstream_of_or_within fruit dehiscence	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
located_in extracellular region	ISM Inferred from Sequence Model more info

NP_850359.1

polygalacturonase abscission zone A. thaliana (PGAZAT); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: cell wall modification involved in abscission, fruit dehiscence, floral organ abscission, anther dehiscence, carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G57510.1); Has 4465 Blast hits to 4447 proteins in 569 species: Archae - 8; Bacteria - 1510; Metazoa - 14; Fungi - 1290; Plants - 1500; Viruses - 5; Other Eukaryotes - 138 (source: NCBI BLink).

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The following sections contain reference sequences that belong to a specific genome build. Explain