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CPK20 calcium-dependent protein kinase 20 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818476, updated on 15-Oct-2023

Summary

Gene symbol
CPK20
Gene description
calcium-dependent protein kinase 20
Primary source
Araport:AT2G38910
Locus tag
AT2G38910
See related
TAIR:AT2G38910
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
calcium-dependent protein kinase 20; T7F6.8; T7F6_8
Summary
member of Calcium Dependent Protein Kinase
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Genomic context

See CPK20 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
7
Sequence:
Chromosome: 2; NC_003071.7 (16244906..16247855, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene Serine protease inhibitor, potato inhibitor I-type family protein Neighboring gene Low temperature and salt responsive protein family Neighboring gene SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-like protein Neighboring gene phosphate transporter 1;4

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
calcium-dependent protein kinase 20
NP_181425.1
  • calcium-dependent protein kinase 20 (CPK20); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium dependent protein kinase 1 (TAIR:AT5G04870.1); Has 134628 Blast hits to 127183 proteins in 3957 species: Archae - 159; Bacteria - 14419; Metazoa - 50012; Fungi - 17942; Plants - 28393; Viruses - 493; Other Eukaryotes - 23210 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    16244906..16247855 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129449.2NP_181425.1  calcium-dependent protein kinase 20 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_181425.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9ZV15
    UniProtKB/TrEMBL
    A0A178VWI7, A0A5S9X587
    Conserved Domains (2) summary
    COG5126
    Location:432572
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
    cd05117
    Location:134391
    STKc_CAMK; The catalytic domain of CAMK family Serine/Threonine Kinases