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hypothetical protein (DUF3527) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817500, updated on 18-Sep-2024

Summary

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Official Full Name
hypothetical protein (DUF3527)
Primary source
TAIR:AT2G29510
Locus tag
AT2G29510
See related
Araport:AT2G29510
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F16P2.11; F16P2_11
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Genomic context

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Location:
chromosome: 2
Exon count:
3
Sequence:
Chromosome: 2; NC_003071.7 (12634437..12638043)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene glutathione S-transferase TAU 1 Neighboring gene HSP20-like chaperones superfamily protein Neighboring gene tRNA-Val Neighboring gene Inositol phosphorylceramide synthase 3 Neighboring gene ncRNA Neighboring gene Tim10/DDP family zinc finger protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_128505.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in plasmodesma HDA PubMed 

General protein information

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Preferred Names
hypothetical protein (DUF3527)
NP_180512.1
  • Protein of unknown function (DUF3527); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3527 (InterPro:IPR021916); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3527) (TAIR:AT5G59020.1); Has 3861 Blast hits to 705 proteins in 135 species: Archae - 0; Bacteria - 66; Metazoa - 411; Fungi - 77; Plants - 149; Viruses - 10; Other Eukaryotes - 3148 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    12634437..12638043
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128505.5 → NP_180512.1  hypothetical protein (DUF3527) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180512.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9X2G1, Q9ZW32
    Conserved Domains (1) summary
    pfam12043
    Location:522 → 775
    DUF3527; Domain of unknown function (DUF3527)
Nucleotide Protein
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