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Hyp O-arabinosyltransferase-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817064, updated on 18-Sep-2024

Summary

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Official Full Name
Hyp O-arabinosyltransferase-like protein
Primary source
TAIR:AT2G25260
Locus tag
AT2G25260
See related
Araport:AT2G25260
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T22F11.15; T22F11_15
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Genomic context

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Location:
chromosome: 2
Exon count:
8
Sequence:
Chromosome: 2; NC_003071.7 (10755524..10757947, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene serine/arginine repetitive matrix-like protein Neighboring gene miscRNA Neighboring gene uncharacterized protein Neighboring gene AmmeMemoRadiSam system protein B Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of three hydroxyproline O-arabinosyltransferases in Arabidopsis thaliana. Ogawa-Ohnishi M, et al. Nat Chem Biol, 2013 Nov. PMID 24036508
  2. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
  3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_128083.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables glycosyltransferase activity ISM
Inferred from Sequence Model
more info
 PubMed 
enables hydroxyproline O-arabinosyltransferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Hyp O-arabinosyltransferase-like protein
NP_180098.3
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    10755524..10757947 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128083.4 → NP_180098.3  Hyp O-arabinosyltransferase-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180098.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q494Q2, Q9SIR7
    UniProtKB/TrEMBL
    A0A178VXC3, A0A1W6AK26, A0A384KWV8, A0A654EW10
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q494Q2.1

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