U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MAN2 Glycosyl hydrolase superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816596, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
MAN2
Official Full Name
Glycosyl hydrolase superfamily protein
Primary source
TAIR:AT2G20680
Locus tag
AT2G20680
See related
Araport:AT2G20680
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtMAN2; endo-beta-mannase 2; F5H14.35; F5H14_35
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See MAN2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Sequence:
Chromosome: 2; NC_003071.7 (8920447..8923227)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ralf-like 14 Neighboring gene sugar phosphate exchanger, putative (DUF506) Neighboring gene lumazine-binding family protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene LORELEI-LIKE-GPI ANCHORED PROTEIN 2 Neighboring gene ncRNA

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Biochemical characterization of the novel endo-β-mannanase AtMan5-2 from Arabidopsis thaliana. Wang Y, et al. Plant Sci, 2015 Dec. PMID 26706067
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. AtMan5-2 may play a role in glucomannan regulation in the stem and seed coat mucilage. [Man5-2]
    Title: Biochemical characterization of the novel endo-β-mannanase AtMan5-2 from Arabidopsis thaliana.
Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Homology

NM_127632.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables mannan endo-1,4-beta-mannosidase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within mannan metabolic process IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Glycosyl hydrolase superfamily protein
NP_179660.2
  • Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT4G28320.1); Has 827 Blast hits to 815 proteins in 205 species: Archae - 18; Bacteria - 244; Metazoa - 38; Fungi - 187; Plants - 310; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    8920447..8923227
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127632.3 → NP_179660.2  Glycosyl hydrolase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179660.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q7Y223, Q9SKU9
    UniProtKB/TrEMBL
    A0A5S9WZU0, A0A654EVU2
    Conserved Domains (1) summary
    cl23725
    Location:53 → 340
    Glyco_hydro_1; Glycosyl hydrolase family 1
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7Y223.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools