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pantothenate kinase [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816241, updated on 18-Sep-2024

Summary

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Official Full Name
pantothenate kinase
Primary source
TAIR:AT2G17340
Locus tag
AT2G17340
See related
Araport:AT2G17340
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F5J6.10; F5J6_10
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Genomic context

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Location:
chromosome: 2
Exon count:
12
Sequence:
Chromosome: 2; NC_003071.7 (7541313..7544383, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene pantothenate kinase Neighboring gene miscRNA Neighboring gene beta-mannosyltransferase-like protein Neighboring gene Ribosomal protein S4 (RPS4A) family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The structure at 1.7 A resolution of the protein product of the At2g17340 gene from Arabidopsis thaliana. Bitto E, et al. Acta Crystallogr Sect F Struct Biol Cryst Commun, 2005 Jul 1. PMID 16511115, Free PMC Article
  2. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
  3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. X-ray crystallographic structure of teh At2g17340 gene from Arabidopsis thaliana
    Title: The structure at 1.7 A resolution of the protein product of the At2g17340 gene from Arabidopsis thaliana.
Submit: New GeneRIF Correction

General gene information

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NM_127289.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables pantothenate kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in coenzyme A biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in cytosol HDA PubMed 
located_in mitochondrion HDA PubMed 

General protein information

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Preferred Names
pantothenate kinase
NP_565412.1
  • Uncharacterised conserved protein (UCP030210); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF89 (InterPro:IPR002791), Uncharacterised conserved protein UCP030210 (InterPro:IPR016949); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein (UCP030210) (TAIR:AT4G35360.1); Has 357 Blast hits to 356 proteins in 130 species: Archae - 52; Bacteria - 55; Metazoa - 104; Fungi - 0; Plants - 135; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    7541313..7544383 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127289.4 → NP_565412.1  pantothenate kinase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565412.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q7XJS9, Q8LCJ8, Q949P3
    UniProtKB/TrEMBL
    A0A654ETK5
    Conserved Domains (1) summary
    pfam01937
    Location:48 → 359
    DUF89; Protein of unknown function DUF89
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q949P3.1

Gene LinkOut

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