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OR6K2 olfactory receptor family 6 subfamily K member 2 [ Homo sapiens (human) ]

Gene ID: 81448, updated on 11-Apr-2024

Summary

Official Symbol
OR6K2provided by HGNC
Official Full Name
olfactory receptor family 6 subfamily K member 2provided by HGNC
Primary source
HGNC:HGNC:15029
See related
Ensembl:ENSG00000196171 AllianceGenome:HGNC:15029
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
OR1-17
Summary
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Orthologs
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Genomic context

Location:
1q23.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (158699678..158700652, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (157836759..157837733, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (158669468..158670442, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 10 subfamily Z member 1 Neighboring gene spectrin alpha, erythrocytic 1 Neighboring gene MPRA-validated peak429 silencer Neighboring gene ReSE screen-validated silencer GRCh37_chr1:158658352-158658566 Neighboring gene CRISPRi-validated cis-regulatory element chr1.9295 Neighboring gene CRISPRi-validated cis-regulatory element chr1.9296 Neighboring gene olfactory receptor family 6 subfamily K member 1 pseudogene Neighboring gene olfactory receptor family 6 subfamily K member 3 Neighboring gene olfactory receptor family 6 subfamily K member 4 pseudogene Neighboring gene olfactory receptor family 6 subfamily K member 5 pseudogene

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables odorant binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables olfactory receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in detection of chemical stimulus involved in sensory perception of smell IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
olfactory receptor 6K2
Names
olfactory receptor OR1-17

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_053139.1 RefSeqGene

    Range
    5045..6019
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001005279.3NP_001005279.1  olfactory receptor 6K2

    See identical proteins and their annotated locations for NP_001005279.1

    Status: VALIDATED

    Source sequence(s)
    AL513205
    Consensus CDS
    CCDS30902.1
    UniProtKB/Swiss-Prot
    B9EH33, Q6IFR6, Q8NGY2
    UniProtKB/TrEMBL
    A0A126GV58
    Related
    ENSP00000352626.2, ENST00000359610.3
    Conserved Domains (2) summary
    pfam00001
    Location:41291
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:33304
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    158699678..158700652 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    157836759..157837733 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)