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PF3D7_0307100 40S ribosomal protein S12, putative [ Plasmodium falciparum 3D7 ]

Gene ID: 814388, updated on 17-May-2024

Summary

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Gene symbol
PF3D7_0307100
Gene description
40S ribosomal protein S12, putative
Primary source
PlasmoDB:PF3D7_0307100
Locus tag
PF3D7_0307100
See related
VEuPathDB:PF3D7_0307100
Gene type
protein coding
RNA name
40S ribosomal protein S12, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
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Genomic context

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Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_000521.4 (312693..313342, complement)

Chromosome 3 - NC_000521.4Genomic Context describing neighboring genes Neighboring gene T-complex protein 1 subunit beta Neighboring gene 40S ribosomal protein S23, putative Neighboring gene ncRNA Neighboring gene 60S ribosomal protein L7, putative Neighboring gene microtubule-associated protein RP/EB family, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000521.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The complete nucleotide sequence of chromosome 3 of Plasmodium falciparum. Bowman S, et al. Nature, 1999 Aug 5. PMID 10448855
  2. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article
  3. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
  4. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by GeneDB

Function Evidence Code Pubs
enables structural constituent of ribosome ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit ISS
Inferred from Sequence or Structural Similarity
more info
  
located_in nucleus HDA PubMed 

General protein information

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Preferred Names
40S ribosomal protein S12, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000521.4 Reference assembly

    Range
    312693..313342 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001351110.1 → XP_001351146.1  40S ribosomal protein S12, putative [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001351146.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O97249
    UniProtKB/TrEMBL
    A0A024VCG5, A0A024VWG9, A0A024XFL4, A0A0L7K8C1, A0A2I0BTS4, W4IQ62, W7F830, W7G4D8, W7JID8, W7JTJ4
    Conserved Domains (1) summary
    pfam01248
    Location:23 → 119
    Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
3J7A_R.1
6OKK_R.1
O97249.1

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