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PF3D7_1206600 DNA-directed RNA polymerase III subunit RPC2, putative [ Plasmodium falciparum 3D7 ]

Gene ID: 811119, updated on 12-Sep-2024

Summary

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Gene symbol
PF3D7_1206600
Gene description
DNA-directed RNA polymerase III subunit RPC2, putative
Locus tag
PF3D7_1206600
See related
PlasmoDB:PF3D7_1206600; VEuPathDB:PF3D7_1206600
Gene type
protein coding
RNA name
DNA-directed RNA polymerase III subunit RPC2, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
Orthologs
all
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Genomic context

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See PF3D7_1206600 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
1
Sequence:
Chromosome: 12; NC_037284.1 (294997..299349, complement)

Chromosome 12 - NC_037284.1Genomic Context describing neighboring genes Neighboring gene rhodanese like protein, putative Neighboring gene Tat binding protein 1(TBP-1)-interacting protein, putative Neighboring gene eukaryotic translation initiation factor 5, putative Neighboring gene conserved Plasmodium protein, unknown function

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037284.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by GeneDB

Component Evidence Code Pubs
part_of RNA polymerase III complex ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
DNA-directed RNA polymerase III subunit RPC2, putative
XP_001350475.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037284.1 Reference assembly

    Range
    294997..299349 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001350439.1 → XP_001350475.1  DNA-directed RNA polymerase III subunit RPC2, putative [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001350475.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A024W4H2, A0A0L7KFL9, Q8I5X9, W4IDE2, W7G2M7, W7JRZ0
    Conserved Domains (3) summary
    cd00653
    Location:255 → 1446
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04566
    Location:785 → 846
    RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    pfam04567
    Location:869 → 907
    RNA_pol_Rpb2_5; RNA polymerase Rpb2, domain 5
Nucleotide Protein
Heading Accession and Version

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