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PF3D7_1116200.1 pyridoxine biosynthesis protein PDX2 [ Plasmodium falciparum 3D7 ]

Gene ID: 810716, updated on 6-Oct-2023

Summary

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Gene symbol
PF3D7_1116200.1
Gene description
pyridoxine biosynthesis protein PDX2
Locus tag
PF3D7_1116200.1
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
Old locus tag
PF3D7_1116200.2
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Genomic context

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See PF3D7_1116200.1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
7
Sequence:
Chromosome: 11; NC_037282.1 (615744..617186, complement)

Chromosome 11 - NC_037282.1Genomic Context describing neighboring genes Neighboring gene rhoptry neck protein 4 Neighboring gene serine esterase, putative Neighboring gene peptidyl-prolyl cis-trans isomerase Neighboring gene guanine nucleotide-exchange factor SEC12

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037282.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
pyridoxine biosynthesis protein PDX2
XP_001347840.2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037282.1 Reference assembly

    Range
    615744..617186 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024473313.1 → XP_024329120.1  pyridoxine biosynthesis protein PDX2 [Plasmodium falciparum 3D7]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2I0C0L8
    Conserved Domains (1) summary
    cl00020
    Location:6 → 172
    GAT_1; Type 1 glutamine amidotransferase (GATase1)-like domain

  2. XM_001347804.2 → XP_001347840.2  pyridoxine biosynthesis protein PDX2 [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001347840.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    A0A143ZYM6, A0A144A0A4, Q5ND68, Q8IIK4
    UniProtKB/TrEMBL
    A0A024W5Z7, A0A024WNX8, A0A2I0C0L6, W4IER9, W7FJS4
    Conserved Domains (1) summary
    cd01749
    Location:6 → 210
    GATase1_PB; Glutamine Amidotransferase (GATase_I) involved in pyridoxine biosynthesis
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8IIK4.2

Gene LinkOut

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