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PF3D7_1032900 RNA polymerase II-associated protein 1, putative [ Plasmodium falciparum 3D7 ]

Gene ID: 810477, updated on 12-Sep-2024

Summary

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Gene symbol
PF3D7_1032900
Gene description
RNA polymerase II-associated protein 1, putative
Locus tag
PF3D7_1032900
See related
PlasmoDB:PF3D7_1032900; VEuPathDB:PF3D7_1032900
Gene type
protein coding
RNA name
RNA polymerase II-associated protein 1, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
Orthologs
all
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Genomic context

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See PF3D7_1032900 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
1
Sequence:
Chromosome: 10; NC_037281.1 (1315718..1320949, complement)

Chromosome 10 - NC_037281.1Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene leucine-rich repeat protein Neighboring gene heptatricopeptide repeat-containing protein HPR1, putative Neighboring gene S-adenosylmethionine decarboxylase/ornithine decarboxylase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037281.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
RNA polymerase II-associated protein 1, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037281.1 Reference assembly

    Range
    1315718..1320949 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001347568.2 → XP_001347604.2  RNA polymerase II-associated protein 1, putative [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001347604.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2I0BRA5, Q8IJ79, W4IHD1
    Conserved Domains (3) summary
    cl17507
    Location:519 → 585
    LbR-like; Left-handed beta-roll, including virulence factors and various other proteins
    pfam08620
    Location:241 → 318
    RPAP1_C; RPAP1-like, C-terminal
    NF035936
    Location:448 → 585
    agg_sub_LPXTH; serine-rich aggregation substance UasX
Nucleotide Protein
Heading Accession and Version

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