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PF3D7_1030100 pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22, putative [ Plasmodium falciparum 3D7 ]

Gene ID: 810451, updated on 17-May-2024

Summary

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Gene symbol
PF3D7_1030100
Gene description
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22, putative
Primary source
PlasmoDB:PF3D7_1030100
Locus tag
PF3D7_1030100
See related
VEuPathDB:PF3D7_1030100
Gene type
protein coding
RNA name
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
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Genomic context

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Location:
chromosome: 10
Exon count:
4
Sequence:
Chromosome: 10; NC_037281.1 (1224519..1229092, complement)

Chromosome 10 - NC_037281.1Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene transcription elongation factor SPT4, putative Neighboring gene claudin-like apicomplexan microneme protein, putative Neighboring gene conserved Plasmodium protein, unknown function

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037281.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556
  2. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

General protein information

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Preferred Names
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22, putative
XP_001347578.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037281.1 Reference assembly

    Range
    1224519..1229092 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001347542.1 → XP_001347578.1  pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22, putative [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001347578.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A024X7D4, A0A2I0BRF5, Q8IJA4, W7FHR6
    Conserved Domains (3) summary
    COG1643
    Location:587 → 1290
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
    cd05684
    Location:329 → 408
    S1_DHX8_helicase; The N-terminal S1 domain of human ATP-dependent RNA helicase DHX8, a DEAH (Asp-Glu-Ala-His) box polypeptide. The DEAH-box RNA helicases are thought to play key roles in pre-mRNA splicing and DHX8 facilitates nuclear export of spliced mRNA by releasing ...
    cl41749
    Location:4 → 54
    GH2_like; GIPC homology 2 (GH2) domain-like family
Nucleotide Protein
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