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LMH87_000486 hypothetical protein [ Akanthomyces muscarius ]

Gene ID: 80887645, updated on 20-Nov-2023

Summary

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Gene symbol
LMH87_000486
Gene description
hypothetical protein
Locus tag
LMH87_000486
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Akanthomyces muscarius (strain: Ve6, nat-host: Trialeurodes vaporariorum)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Cordycipitaceae; Akanthomyces
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Genomic context

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See LMH87_000486 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
3
Sequence:
Chromosome: 6; NC_079246.1 (1354569..1355904)

Chromosome 6 - NC_079246.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079246.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA clamp loader activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA-templated DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Ctf18 RFC-like complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of DNA replication factor C complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of Elg1 RFC-like complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of Rad17 RFC-like complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_079246.1 Reference assembly

    Range
    1354569..1355904
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056198400.1 → XP_056055354.1  hypothetical protein LMH87_000486 [Akanthomyces muscarius]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A9W8QF37
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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