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rfc4 DNA replication factor C complex subunit Rfc4 [ Schizosaccharomyces osmophilus ]

Gene ID: 80875203, updated on 6-Jun-2024

Summary

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Gene symbol
rfc4
Gene description
DNA replication factor C complex subunit Rfc4
Locus tag
SOMG_01721
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces osmophilus (strain: CBS 15793, culture-collection: CBS:15793, type-material: holotype of Schizosaccharomyces osmophilus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See rfc4 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_079238.1 (3787933..3789126, complement)

Chromosome 1 - NC_079238.1Genomic Context describing neighboring genes Neighboring gene DNA-directed RNA polymerase I and III subunit Rpc19 Neighboring gene CAAX prenyl protease Neighboring gene MCM binding protein-like protein Mcb1 Neighboring gene SUMO E3 ligase Pli1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079238.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A high-quality reference genome for the fission yeast Schizosaccharomyces osmophilus. Jia GS, et al. G3 (Bethesda), 2023 Apr 11. PMID 36748990, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA clamp loader activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA-templated DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Ctf18 RFC-like complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of DNA replication factor C complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of Elg1 RFC-like complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of Rad17 RFC-like complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA replication factor C complex subunit Rfc4

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_079238.1 Reference assembly

    Range
    3787933..3789126 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056180514.1 → XP_056036978.1  DNA replication factor C complex subunit Rfc4 [Schizosaccharomyces osmophilus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAE9WAQ5
Nucleotide Protein
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Gene LinkOut

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